Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Gm43125-201ENSMUST00000201724 730 ntBASIC13.6□□□□□ -0.23
Capn1O35350 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.6□□□□□ -0.23
Capn1O35350 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Capn1O35350 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Capn1O35350 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Capn1O35350 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Capn1O35350 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Capn1O35350 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.6□□□□□ -0.23
Capn1O35350 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.6□□□□□ -0.23
Capn1O35350 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Capn1O35350 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.59□□□□□ -0.23
Capn1O35350 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.59□□□□□ -0.23
Capn1O35350 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Capn1O35350 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.59□□□□□ -0.23
Capn1O35350 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.59□□□□□ -0.23
Capn1O35350 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.59□□□□□ -0.23
Capn1O35350 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.59□□□□□ -0.23
Capn1O35350 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.59□□□□□ -0.23
Capn1O35350 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Capn1O35350 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Capn1O35350 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.59□□□□□ -0.23
Capn1O35350 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Capn1O35350 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Capn1O35350 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Capn1O35350 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.58□□□□□ -0.23
Capn1O35350 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Capn1O35350 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Capn1O35350 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Capn1O35350 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Capn1O35350 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Capn1O35350 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Capn1O35350 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Capn1O35350 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Capn1O35350 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Capn1O35350 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Capn1O35350 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Capn1O35350 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Capn1O35350 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.58□□□□□ -0.24
Capn1O35350 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Capn1O35350 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Capn1O35350 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.58□□□□□ -0.24
Capn1O35350 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.58□□□□□ -0.24
Capn1O35350 AA543401-201ENSMUST00000164248 1269 ntBASIC13.58□□□□□ -0.24
Capn1O35350 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Capn1O35350 Gm7063-201ENSMUST00000186840 981 ntBASIC13.58□□□□□ -0.24
Capn1O35350 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Capn1O35350 Gm18057-201ENSMUST00000208220 503 ntBASIC13.58□□□□□ -0.24
Capn1O35350 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.58□□□□□ -0.24
Capn1O35350 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.58□□□□□ -0.24
Capn1O35350 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.58□□□□□ -0.24
Capn1O35350 Gm10154-201ENSMUST00000084445 354 ntBASIC13.58□□□□□ -0.24
Capn1O35350 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Capn1O35350 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Capn1O35350 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Capn1O35350 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Capn1O35350 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms