Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Gm6659-201ENSMUST00000174752 547 ntBASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.4□□□□□ -0.26
Shisa8J3QNX5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Shisa8J3QNX5 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.4□□□□□ -0.27
Shisa8J3QNX5 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Gm6296-201ENSMUST00000222599 943 ntBASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa8J3QNX5 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa8J3QNX5 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms