Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Gm14928-201ENSMUST00000120198 477 ntBASIC17.54■□□□□ 0.4
Ube4aE9Q735 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Gm28631-201ENSMUST00000190740 334 ntBASIC17.54■□□□□ 0.4
Ube4aE9Q735 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.54■□□□□ 0.4
Ube4aE9Q735 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube4aE9Q735 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Gm12585-201ENSMUST00000117307 290 ntBASIC17.53■□□□□ 0.4
Ube4aE9Q735 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.53■□□□□ 0.4
Ube4aE9Q735 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube4aE9Q735 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.52■□□□□ 0.4
Ube4aE9Q735 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.52■□□□□ 0.4
Ube4aE9Q735 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Gm12490-201ENSMUST00000120255 560 ntBASIC17.52■□□□□ 0.4
Ube4aE9Q735 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Gm33320-201ENSMUST00000192232 530 ntBASIC17.52■□□□□ 0.4
Ube4aE9Q735 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4aE9Q735 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube4aE9Q735 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ube4aE9Q735 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Ube4aE9Q735 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.51■□□□□ 0.39
Ube4aE9Q735 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Gm12882-201ENSMUST00000121696 517 ntBASIC17.51■□□□□ 0.39
Ube4aE9Q735 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Gm7653-201ENSMUST00000214567 508 ntBASIC17.51■□□□□ 0.39
Ube4aE9Q735 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.51■□□□□ 0.39
Ube4aE9Q735 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ube4aE9Q735 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.51■□□□□ 0.39
Ube4aE9Q735 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms