Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm28678-201ENSMUST00000191593 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm20910-201ENSMUST00000193268 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm21871-201ENSMUST00000194621 696 ntBASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb9E9Q5G2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Gm27618-201ENSMUST00000183671 60 ntBASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb9E9Q5G2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb9E9Q5G2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Gm5566-201ENSMUST00000116118 459 ntBASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 AA543401-201ENSMUST00000164248 1269 ntBASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb9E9Q5G2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb9E9Q5G2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Gm10275-202ENSMUST00000168697 495 ntBASIC17.2■□□□□ 0.34
Pcdhb9E9Q5G2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms