Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Gm8805-201ENSMUST00000117848 313 ntBASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Gm16177-201ENSMUST00000120728 718 ntBASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Mir6979-201ENSMUST00000183927 56 ntBASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Gm1335-201ENSMUST00000121653 386 ntBASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Gm4804-201ENSMUST00000182234 999 ntBASIC13.06□□□□□ -0.32
Sptbn4E9PX29 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.06□□□□□ -0.32
Sptbn4E9PX29 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.05□□□□□ -0.32
Sptbn4E9PX29 B9d1os-201ENSMUST00000137010 674 ntBASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Gm27331-201ENSMUST00000183705 60 ntBASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Proscos-202ENSMUST00000178990 666 ntBASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.05□□□□□ -0.32
Sptbn4E9PX29 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Gm2451-201ENSMUST00000199447 999 ntBASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Gm10290-201ENSMUST00000200451 999 ntBASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.05□□□□□ -0.32
Sptbn4E9PX29 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sptbn4E9PX29 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.04□□□□□ -0.32
Sptbn4E9PX29 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sptbn4E9PX29 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Gm4909-201ENSMUST00000118749 794 ntBASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.03□□□□□ -0.32
Sptbn4E9PX29 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms