Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shank1D3YZU1 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.13□□□□□ -0.31
Shank1D3YZU1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.12□□□□□ -0.31
Shank1D3YZU1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.12□□□□□ -0.31
Shank1D3YZU1 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Gm16476-201ENSMUST00000221544 139 ntBASIC13.12□□□□□ -0.31
Shank1D3YZU1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Shank1D3YZU1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.12□□□□□ -0.31
Shank1D3YZU1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.11□□□□□ -0.31
Shank1D3YZU1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.11□□□□□ -0.31
Shank1D3YZU1 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Gm28760-201ENSMUST00000185995 736 ntBASIC13.11□□□□□ -0.31
Shank1D3YZU1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Shank1D3YZU1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.11□□□□□ -0.31
Shank1D3YZU1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Gm27631-201ENSMUST00000184163 466 ntBASIC13.1□□□□□ -0.31
Shank1D3YZU1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Gm9797-201ENSMUST00000052902 613 ntBASIC13.1□□□□□ -0.31
Shank1D3YZU1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.1□□□□□ -0.31
Shank1D3YZU1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms