Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Gm21854-201ENSMUST00000179901 471 ntBASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Gm45668-201ENSMUST00000211271 493 ntBASIC16.93■□□□□ 0.3
Clrn2B2RVW2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clrn2B2RVW2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Gm15823-201ENSMUST00000064305 670 ntBASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn2B2RVW2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.91■□□□□ 0.3
Clrn2B2RVW2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Gm6916-202ENSMUST00000205523 195 ntBASIC16.91■□□□□ 0.3
Clrn2B2RVW2 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Clrn2B2RVW2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.9■□□□□ 0.3
Clrn2B2RVW2 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Gm25857-201ENSMUST00000082788 129 ntBASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn2B2RVW2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms