Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Gm9797-201ENSMUST00000052902 613 ntBASIC12.36□□□□□ -0.43
Col6a4A2AX52 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.36□□□□□ -0.43
Col6a4A2AX52 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.36□□□□□ -0.43
Col6a4A2AX52 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Gm12091-201ENSMUST00000146791 830 ntBASIC12.35□□□□□ -0.43
Col6a4A2AX52 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.35□□□□□ -0.43
Col6a4A2AX52 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a4A2AX52 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.34□□□□□ -0.43
Col6a4A2AX52 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.34□□□□□ -0.43
Col6a4A2AX52 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a4A2AX52 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col6a4A2AX52 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col6a4A2AX52 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col6a4A2AX52 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a4A2AX52 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms