Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm5837-201ENSMUST00000191844 1369 ntBASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm27704-201ENSMUST00000185094 107 ntBASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm11453-201ENSMUST00000117318 1007 ntBASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm23547-201ENSMUST00000158210 271 ntBASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms