Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-4A0A075B6B4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-4A0A075B6B4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Gm11594-201ENSMUST00000122313 162 ntBASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Gm10175-201ENSMUST00000086013 645 ntBASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-4A0A075B6B4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms