Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav16nA0A075B634 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Gm29518-201ENSMUST00000190858 372 ntBASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav16nA0A075B634 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Gm8655-201ENSMUST00000221159 852 ntBASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16nA0A075B634 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav16nA0A075B634 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms