Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.4□□□□□ -0.26
Trav8n-2A0A075B633 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.27
Trav8n-2A0A075B633 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Gm28760-201ENSMUST00000185995 736 ntBASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Gm45668-201ENSMUST00000211271 493 ntBASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Gm9908-201ENSMUST00000211534 448 ntBASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Gm9797-201ENSMUST00000052902 613 ntBASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Mir125a-201ENSMUST00000083545 68 ntBASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav8n-2A0A075B633 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Gm9726-201ENSMUST00000180321 678 ntBASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav8n-2A0A075B633 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8n-2A0A075B633 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms