Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-1A0A075B5Z8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm7284-201ENSMUST00000131667 944 ntBASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-1A0A075B5Z8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-1A0A075B5Z8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-1A0A075B5Z8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-1A0A075B5Z8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-1A0A075B5Z8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-1A0A075B5Z8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-1A0A075B5Z8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav6-1A0A075B5Z8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-1A0A075B5Z8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-1A0A075B5Z8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-1A0A075B5Z8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-1A0A075B5Z8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.77□□□□□ -0.52
Trav6-1A0A075B5Z8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm14042-201ENSMUST00000120139 833 ntBASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm7787-201ENSMUST00000216858 688 ntBASIC11.77□□□□□ -0.53
Trav6-1A0A075B5Z8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms