Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Gm13036-201ENSMUST00000117799 748 ntBASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3550W4VSN7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Gm18246-201ENSMUST00000221023 728 ntBASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3550W4VSN7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.46□□□□□ -0.41
Gm3550W4VSN7 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm3550W4VSN7 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms