Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx6Q9R1R0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx6Q9R1R0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx6Q9R1R0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx6Q9R1R0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx6Q9R1R0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Gm8344-201ENSMUST00000119813 856 ntBASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Gm28941-201ENSMUST00000185536 1017 ntBASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Gm9916-201ENSMUST00000192943 1228 ntBASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Gm45384-201ENSMUST00000210451 277 ntBASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lhx6Q9R1R0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Gm15824-201ENSMUST00000119516 955 ntBASIC14□□□□□ -0.17
Lhx6Q9R1R0 Gm11233-201ENSMUST00000122357 634 ntBASIC14□□□□□ -0.17
Lhx6Q9R1R0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14□□□□□ -0.17
Lhx6Q9R1R0 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC14□□□□□ -0.17
Lhx6Q9R1R0 Gm20553-201ENSMUST00000204205 844 ntBASIC14□□□□□ -0.17
Lhx6Q9R1R0 AC147366.1-201ENSMUST00000227671 852 ntBASIC14□□□□□ -0.17
Lhx6Q9R1R0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx6Q9R1R0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms