Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
Cpsf1Q9EPU4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpsf1Q9EPU4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpsf1Q9EPU4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpsf1Q9EPU4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpsf1Q9EPU4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC20.09■□□□□ 0.81
Cpsf1Q9EPU4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpsf1Q9EPU4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cpsf1Q9EPU4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cpsf1Q9EPU4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC20.09■□□□□ 0.81
Cpsf1Q9EPU4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cpsf1Q9EPU4 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC20.09■□□□□ 0.81
Cpsf1Q9EPU4 Gm43509-201ENSMUST00000196551 2594 ntBASIC20.09■□□□□ 0.81
Cpsf1Q9EPU4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Cpsf1Q9EPU4 Gm16425-201ENSMUST00000118143 3130 ntBASIC20.09■□□□□ 0.81
Cpsf1Q9EPU4 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpsf1Q9EPU4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cpsf1Q9EPU4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cpsf1Q9EPU4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cpsf1Q9EPU4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cpsf1Q9EPU4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Cpsf1Q9EPU4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC20.08■□□□□ 0.8
Cpsf1Q9EPU4 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cpsf1Q9EPU4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cpsf1Q9EPU4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC20.08■□□□□ 0.8
Cpsf1Q9EPU4 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC20.08■□□□□ 0.8
Cpsf1Q9EPU4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC20.08■□□□□ 0.8
Cpsf1Q9EPU4 Gm44981-201ENSMUST00000205549 1943 ntBASIC20.08■□□□□ 0.8
Cpsf1Q9EPU4 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC20.08■□□□□ 0.8
Cpsf1Q9EPU4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cpsf1Q9EPU4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Cpsf1Q9EPU4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cpsf1Q9EPU4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cpsf1Q9EPU4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cpsf1Q9EPU4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cpsf1Q9EPU4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpsf1Q9EPU4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpsf1Q9EPU4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Cpsf1Q9EPU4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC20.07■□□□□ 0.8
Cpsf1Q9EPU4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cpsf1Q9EPU4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cpsf1Q9EPU4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpsf1Q9EPU4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpsf1Q9EPU4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpsf1Q9EPU4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC20.06■□□□□ 0.8
Cpsf1Q9EPU4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC20.06■□□□□ 0.8
Cpsf1Q9EPU4 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC20.06■□□□□ 0.8
Cpsf1Q9EPU4 Gm45212-201ENSMUST00000205831 3403 ntBASIC20.06■□□□□ 0.8
Cpsf1Q9EPU4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC20.06■□□□□ 0.8
Cpsf1Q9EPU4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpsf1Q9EPU4 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cpsf1Q9EPU4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cpsf1Q9EPU4 Gm6473-201ENSMUST00000188572 1210 ntBASIC20.06■□□□□ 0.8
Cpsf1Q9EPU4 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpsf1Q9EPU4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpsf1Q9EPU4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cpsf1Q9EPU4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC20.06■□□□□ 0.8
Cpsf1Q9EPU4 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpsf1Q9EPU4 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Cpsf1Q9EPU4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC20.05■□□□□ 0.8
Cpsf1Q9EPU4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf1Q9EPU4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf1Q9EPU4 AC121804.3-201ENSMUST00000223420 295 ntBASIC20.05■□□□□ 0.8
Cpsf1Q9EPU4 AC154806.6-201ENSMUST00000228192 202 ntBASIC20.05■□□□□ 0.8
Cpsf1Q9EPU4 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cpsf1Q9EPU4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf1Q9EPU4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cpsf1Q9EPU4 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf1Q9EPU4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC20.05■□□□□ 0.8
Cpsf1Q9EPU4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf1Q9EPU4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cpsf1Q9EPU4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpsf1Q9EPU4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Gm4204-201ENSMUST00000110798 1231 ntBASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpsf1Q9EPU4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpsf1Q9EPU4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms