Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Olfr286-202ENSMUST00000205305 969 ntBASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Gm44608-201ENSMUST00000206827 855 ntBASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Gm7293-201ENSMUST00000216682 1007 ntBASIC16.45■□□□□ 0.22
Upf1Q9EPU0 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Upf1Q9EPU0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Gm14017-201ENSMUST00000121934 386 ntBASIC16.44■□□□□ 0.22
Upf1Q9EPU0 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Upf1Q9EPU0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 AC154680.1-201ENSMUST00000224376 859 ntBASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Upf1Q9EPU0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.42■□□□□ 0.22
Upf1Q9EPU0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Upf1Q9EPU0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms