Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgn3Q9DCB1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Gm9172-201ENSMUST00000212092 954 ntBASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgn3Q9DCB1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgn3Q9DCB1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Gm8344-201ENSMUST00000119813 856 ntBASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Gm18041-201ENSMUST00000218210 618 ntBASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Hmgn3Q9DCB1 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Hmgn3Q9DCB1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hmgn3Q9DCB1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms