Protein–RNA interactions for Protein: Q9CZA6

Nde1, Nuclear distribution protein nudE homolog 1, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1Q9CZA6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nde1Q9CZA6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.38□□□□□ -0.11
Nde1Q9CZA6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nde1Q9CZA6 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nde1Q9CZA6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.38□□□□□ -0.11
Nde1Q9CZA6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nde1Q9CZA6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nde1Q9CZA6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nde1Q9CZA6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nde1Q9CZA6 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nde1Q9CZA6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Gm25016-201ENSMUST00000158399 131 ntBASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nde1Q9CZA6 Carlr-201ENSMUST00000181515 2574 ntBASIC14.36□□□□□ -0.11
Nde1Q9CZA6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Gm15565-201ENSMUST00000118890 427 ntBASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Gm44454-201ENSMUST00000198541 138 ntBASIC14.36□□□□□ -0.11
Nde1Q9CZA6 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nde1Q9CZA6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nde1Q9CZA6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms