Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Gm12497-201ENSMUST00000138778 237 ntBASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Gm9449-201ENSMUST00000207265 1011 ntBASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Gm9172-201ENSMUST00000212092 954 ntBASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Mrpl55Q9CZ83 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Gm2651-201ENSMUST00000203560 838 ntBASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Gm32996-201ENSMUST00000199828 1447 ntBASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Mrpl55Q9CZ83 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Mrpl55Q9CZ83 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Mrpl55Q9CZ83 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Mrpl55Q9CZ83 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Mrpl55Q9CZ83 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Mrpl55Q9CZ83 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Mrpl55Q9CZ83 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Mrpl55Q9CZ83 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Mrpl55Q9CZ83 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms