Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rnf135Q9CWS1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Gm4995-201ENSMUST00000117247 432 ntBASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf135Q9CWS1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Gm18246-201ENSMUST00000221023 728 ntBASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf135Q9CWS1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf135Q9CWS1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf135Q9CWS1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms