Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Gm7153-201ENSMUST00000117092 455 ntBASIC12.04□□□□□ -0.48
Rer1Q9CQU3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Gm17971-201ENSMUST00000190239 806 ntBASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rer1Q9CQU3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Gm12008-201ENSMUST00000117791 755 ntBASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Gm23547-201ENSMUST00000158210 271 ntBASIC12.03□□□□□ -0.48
Rer1Q9CQU3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Gm4899-201ENSMUST00000178708 719 ntBASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Gm10060-201ENSMUST00000212002 111 ntBASIC12.03□□□□□ -0.48
Rer1Q9CQU3 AV026068-213ENSMUST00000223675 1171 ntBASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Rer1Q9CQU3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Rer1Q9CQU3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Rer1Q9CQU3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
Rer1Q9CQU3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Rer1Q9CQU3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rer1Q9CQU3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rer1Q9CQU3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rer1Q9CQU3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.02□□□□□ -0.49
Rer1Q9CQU3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rer1Q9CQU3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.02□□□□□ -0.49
Rer1Q9CQU3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rer1Q9CQU3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.02□□□□□ -0.49
Rer1Q9CQU3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rer1Q9CQU3 Mir8098-201ENSMUST00000184011 137 ntBASIC12.02□□□□□ -0.49
Rer1Q9CQU3 Gm5864-201ENSMUST00000202263 970 ntBASIC12.02□□□□□ -0.49
Rer1Q9CQU3 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.02□□□□□ -0.49
Rer1Q9CQU3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rer1Q9CQU3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rer1Q9CQU3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rer1Q9CQU3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms