Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim33Q99PP7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trim33Q99PP7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim33Q99PP7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.6□□□□□ -0.07
Trim33Q99PP7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trim33Q99PP7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim33Q99PP7 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim33Q99PP7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim33Q99PP7 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Trim33Q99PP7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim33Q99PP7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim33Q99PP7 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trim33Q99PP7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Trim33Q99PP7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim33Q99PP7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trim33Q99PP7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trim33Q99PP7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trim33Q99PP7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trim33Q99PP7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trim33Q99PP7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.58□□□□□ -0.07
Trim33Q99PP7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim33Q99PP7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.58□□□□□ -0.08
Trim33Q99PP7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.58□□□□□ -0.08
Trim33Q99PP7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Gm16198-201ENSMUST00000118766 670 ntBASIC14.57□□□□□ -0.08
Trim33Q99PP7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim33Q99PP7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Gm2272-201ENSMUST00000194903 582 ntBASIC14.57□□□□□ -0.08
Trim33Q99PP7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Gm45747-201ENSMUST00000212203 999 ntBASIC14.57□□□□□ -0.08
Trim33Q99PP7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trim33Q99PP7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms