Protein–RNA interactions for Protein: Q99LM3

Smtnl1, Smoothelin-like protein 1, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smtnl1Q99LM3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.11■□□□□ 0.17
Smtnl1Q99LM3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smtnl1Q99LM3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Gm13036-201ENSMUST00000117799 748 ntBASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Gm9726-201ENSMUST00000180321 678 ntBASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Gm28659-201ENSMUST00000188013 759 ntBASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smtnl1Q99LM3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smtnl1Q99LM3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smtnl1Q99LM3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smtnl1Q99LM3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.08■□□□□ 0.17
Smtnl1Q99LM3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smtnl1Q99LM3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smtnl1Q99LM3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Smtnl1Q99LM3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Smtnl1Q99LM3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smtnl1Q99LM3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms