Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Gm38225-201ENSMUST00000194001 393 ntBASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb22Q91XZ8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Gm23935-201ENSMUST00000102303 57 ntBASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Gm24270-201ENSMUST00000102326 57 ntBASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Gm24245-201ENSMUST00000157318 57 ntBASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Gm43575-201ENSMUST00000196420 516 ntBASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Gm44335-201ENSMUST00000196879 141 ntBASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Gm44297-201ENSMUST00000198304 141 ntBASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Gm44346-201ENSMUST00000198851 141 ntBASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdhb22Q91XZ8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Gm23547-201ENSMUST00000158210 271 ntBASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Gm19891-201ENSMUST00000189771 303 ntBASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb22Q91XZ8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb22Q91XZ8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb22Q91XZ8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb22Q91XZ8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb22Q91XZ8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb22Q91XZ8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb22Q91XZ8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb22Q91XZ8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb22Q91XZ8 Gm25287-201ENSMUST00000103846 110 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms