Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga4Q91XY4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga4Q91XY4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga4Q91XY4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga4Q91XY4 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.5□□□□□ -0.09
Pcdhga4Q91XY4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga4Q91XY4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga4Q91XY4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhga4Q91XY4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhga4Q91XY4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga4Q91XY4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga4Q91XY4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga4Q91XY4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga4Q91XY4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhga4Q91XY4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhga4Q91XY4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Gm13597-201ENSMUST00000121239 375 ntBASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Gm44492-201ENSMUST00000197012 141 ntBASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhga4Q91XY4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Gm15427-201ENSMUST00000117288 531 ntBASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhga4Q91XY4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Mir1895-201ENSMUST00000122615 79 ntBASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhga4Q91XY4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms