Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tram1Q91V04 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Tram1Q91V04 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.65□□□□□ -0.38
Tram1Q91V04 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Tram1Q91V04 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Tram1Q91V04 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Tram1Q91V04 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.65□□□□□ -0.38
Tram1Q91V04 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Tram1Q91V04 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tram1Q91V04 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.65□□□□□ -0.38
Tram1Q91V04 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.65□□□□□ -0.38
Tram1Q91V04 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Tram1Q91V04 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tram1Q91V04 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.65□□□□□ -0.38
Tram1Q91V04 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.65□□□□□ -0.39
Tram1Q91V04 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tram1Q91V04 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
Tram1Q91V04 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tram1Q91V04 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tram1Q91V04 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tram1Q91V04 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tram1Q91V04 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tram1Q91V04 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Tram1Q91V04 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.64□□□□□ -0.39
Tram1Q91V04 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tram1Q91V04 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.64□□□□□ -0.39
Tram1Q91V04 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tram1Q91V04 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tram1Q91V04 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tram1Q91V04 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.64□□□□□ -0.39
Tram1Q91V04 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.64□□□□□ -0.39
Tram1Q91V04 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tram1Q91V04 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tram1Q91V04 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.64□□□□□ -0.39
Tram1Q91V04 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.64□□□□□ -0.39
Tram1Q91V04 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.64□□□□□ -0.39
Tram1Q91V04 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.64□□□□□ -0.39
Tram1Q91V04 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.64□□□□□ -0.39
Tram1Q91V04 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Tram1Q91V04 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tram1Q91V04 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tram1Q91V04 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Tram1Q91V04 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tram1Q91V04 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tram1Q91V04 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tram1Q91V04 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Tram1Q91V04 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tram1Q91V04 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Tram1Q91V04 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tram1Q91V04 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Tram1Q91V04 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.63□□□□□ -0.39
Tram1Q91V04 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
Tram1Q91V04 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Tram1Q91V04 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Tram1Q91V04 Gm10013-201ENSMUST00000106074 672 ntBASIC12.63□□□□□ -0.39
Tram1Q91V04 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Gm18032-201ENSMUST00000222541 538 ntBASIC12.63□□□□□ -0.39
Tram1Q91V04 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.63□□□□□ -0.39
Tram1Q91V04 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tram1Q91V04 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms