Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
StrcQ8VIM6 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Gm3961-201ENSMUST00000204425 994 ntBASIC17.16■□□□□ 0.34
StrcQ8VIM6 Gm18056-201ENSMUST00000207670 568 ntBASIC17.16■□□□□ 0.34
StrcQ8VIM6 Gm18061-201ENSMUST00000208350 562 ntBASIC17.16■□□□□ 0.34
StrcQ8VIM6 Gm18063-201ENSMUST00000208529 568 ntBASIC17.16■□□□□ 0.34
StrcQ8VIM6 Gm18052-201ENSMUST00000208750 559 ntBASIC17.16■□□□□ 0.34
StrcQ8VIM6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
StrcQ8VIM6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
StrcQ8VIM6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
StrcQ8VIM6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
StrcQ8VIM6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
StrcQ8VIM6 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
StrcQ8VIM6 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
StrcQ8VIM6 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC17.15■□□□□ 0.34
StrcQ8VIM6 Gm27772-201ENSMUST00000184900 187 ntBASIC17.15■□□□□ 0.34
StrcQ8VIM6 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC17.15■□□□□ 0.34
StrcQ8VIM6 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
StrcQ8VIM6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
StrcQ8VIM6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
StrcQ8VIM6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
StrcQ8VIM6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC17.15■□□□□ 0.34
StrcQ8VIM6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
StrcQ8VIM6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
StrcQ8VIM6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
StrcQ8VIM6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
StrcQ8VIM6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
StrcQ8VIM6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
StrcQ8VIM6 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC17.14■□□□□ 0.34
StrcQ8VIM6 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
StrcQ8VIM6 Gm27682-201ENSMUST00000183930 110 ntBASIC17.14■□□□□ 0.34
StrcQ8VIM6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.14■□□□□ 0.34
StrcQ8VIM6 Gm43822-201ENSMUST00000200285 476 ntBASIC17.14■□□□□ 0.34
StrcQ8VIM6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
StrcQ8VIM6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Gm38341-201ENSMUST00000195357 515 ntBASIC17.14■□□□□ 0.33
StrcQ8VIM6 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Gm38671-201ENSMUST00000200573 130 ntBASIC17.14■□□□□ 0.33
StrcQ8VIM6 Gm7783-201ENSMUST00000204795 781 ntBASIC17.14■□□□□ 0.33
StrcQ8VIM6 Gm29705-201ENSMUST00000212598 474 ntBASIC17.14■□□□□ 0.33
StrcQ8VIM6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
StrcQ8VIM6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
StrcQ8VIM6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
StrcQ8VIM6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
StrcQ8VIM6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
StrcQ8VIM6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
StrcQ8VIM6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
StrcQ8VIM6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
StrcQ8VIM6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.13■□□□□ 0.33
StrcQ8VIM6 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
StrcQ8VIM6 Gm4857-201ENSMUST00000192718 785 ntBASIC17.13■□□□□ 0.33
StrcQ8VIM6 Gm19309-201ENSMUST00000218295 205 ntBASIC17.13■□□□□ 0.33
StrcQ8VIM6 AC155237.1-201ENSMUST00000226196 1279 ntBASIC17.13■□□□□ 0.33
StrcQ8VIM6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
StrcQ8VIM6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
StrcQ8VIM6 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
StrcQ8VIM6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
StrcQ8VIM6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
StrcQ8VIM6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
StrcQ8VIM6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
StrcQ8VIM6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
StrcQ8VIM6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
StrcQ8VIM6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
StrcQ8VIM6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms