Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Gm34391-201ENSMUST00000203706 907 ntBASIC15.21■□□□□ 0.03
Trim60Q8VI40 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.21■□□□□ 0.03
Trim60Q8VI40 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim60Q8VI40 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.21■□□□□ 0.02
Trim60Q8VI40 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim60Q8VI40 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim60Q8VI40 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim60Q8VI40 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim60Q8VI40 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim60Q8VI40 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.2■□□□□ 0.02
Trim60Q8VI40 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Gm15173-201ENSMUST00000122049 433 ntBASIC15.2■□□□□ 0.02
Trim60Q8VI40 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.2■□□□□ 0.02
Trim60Q8VI40 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.2■□□□□ 0.02
Trim60Q8VI40 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim60Q8VI40 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim60Q8VI40 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Gm45167-201ENSMUST00000208007 322 ntBASIC15.19■□□□□ 0.02
Trim60Q8VI40 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim60Q8VI40 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.18■□□□□ 0.02
Trim60Q8VI40 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim60Q8VI40 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms