Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nup35Q8R4R6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12□□□□□ -0.49
Nup35Q8R4R6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Nup35Q8R4R6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nup35Q8R4R6 Gm23634-201ENSMUST00000175071 91 ntBASIC12□□□□□ -0.49
Nup35Q8R4R6 Gm6728-201ENSMUST00000178117 1065 ntBASIC12□□□□□ -0.49
Nup35Q8R4R6 Gm27646-201ENSMUST00000183989 110 ntBASIC12□□□□□ -0.49
Nup35Q8R4R6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12□□□□□ -0.49
Nup35Q8R4R6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Nup35Q8R4R6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Nup35Q8R4R6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12□□□□□ -0.49
Nup35Q8R4R6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12□□□□□ -0.49
Nup35Q8R4R6 Gm14451-201ENSMUST00000121581 1542 ntBASIC12□□□□□ -0.49
Nup35Q8R4R6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Nup35Q8R4R6 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup35Q8R4R6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 AA414768-201ENSMUST00000121924 1257 ntBASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup35Q8R4R6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Gm6296-201ENSMUST00000222599 943 ntBASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nup35Q8R4R6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms