Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf4Q8K4J2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Gm13836-201ENSMUST00000121159 501 ntBASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Gm7889-201ENSMUST00000185591 958 ntBASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Gm18959-201ENSMUST00000208954 655 ntBASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Gm9172-201ENSMUST00000212092 954 ntBASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ebf4Q8K4J2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf4Q8K4J2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms