Protein–RNA interactions for Protein: Q8K1R7

Nek9, Serine/threonine-protein kinase Nek9, mousemouse

Predictions only

Length 984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek9Q8K1R7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nek9Q8K1R7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek9Q8K1R7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek9Q8K1R7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek9Q8K1R7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek9Q8K1R7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek9Q8K1R7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nek9Q8K1R7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek9Q8K1R7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek9Q8K1R7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nek9Q8K1R7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek9Q8K1R7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Nek9Q8K1R7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Gm14767-201ENSMUST00000121559 586 ntBASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Mir1938-201ENSMUST00000158746 100 ntBASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Gm18737-201ENSMUST00000173594 937 ntBASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Gm38319-201ENSMUST00000194537 1266 ntBASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Gm6007-201ENSMUST00000208170 823 ntBASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.11■□□□□ 0.33
Nek9Q8K1R7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nek9Q8K1R7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.1■□□□□ 0.33
Nek9Q8K1R7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Gm18062-201ENSMUST00000208020 547 ntBASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Gm18055-201ENSMUST00000208254 547 ntBASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Gm6180-201ENSMUST00000065243 498 ntBASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nek9Q8K1R7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Gm27680-201ENSMUST00000184192 160 ntBASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Gm38225-201ENSMUST00000194001 393 ntBASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Gm37748-201ENSMUST00000194379 1140 ntBASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Gm6745-201ENSMUST00000199216 526 ntBASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nek9Q8K1R7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms