Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx1Q8C8B0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx1Q8C8B0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Alx1Q8C8B0 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Gm22175-201ENSMUST00000175007 78 ntBASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Gm27430-201ENSMUST00000184585 107 ntBASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Gm44333-201ENSMUST00000197168 107 ntBASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.09■□□□□ 0.33
Alx1Q8C8B0 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Alx1Q8C8B0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Alx1Q8C8B0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Alx1Q8C8B0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Alx1Q8C8B0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Alx1Q8C8B0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Alx1Q8C8B0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Alx1Q8C8B0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Alx1Q8C8B0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Alx1Q8C8B0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.08■□□□□ 0.33
Alx1Q8C8B0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Alx1Q8C8B0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Alx1Q8C8B0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.08■□□□□ 0.33
Alx1Q8C8B0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Alx1Q8C8B0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms