Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smim4Q8C1Q6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Gm24589-201ENSMUST00000116692 94 ntBASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smim4Q8C1Q6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Smim4Q8C1Q6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.3□□□□□ -0.44
Smim4Q8C1Q6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smim4Q8C1Q6 Carlr-201ENSMUST00000181515 2574 ntBASIC12.3□□□□□ -0.44
Smim4Q8C1Q6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Smim4Q8C1Q6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim4Q8C1Q6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
Smim4Q8C1Q6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim4Q8C1Q6 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim4Q8C1Q6 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim4Q8C1Q6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim4Q8C1Q6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smim4Q8C1Q6 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Smim4Q8C1Q6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Smim4Q8C1Q6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim4Q8C1Q6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms