Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.22□□□□□ -0.13
Cpne3Q8BT60 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Gm12134-201ENSMUST00000122109 520 ntBASIC14.21□□□□□ -0.13
Cpne3Q8BT60 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cpne3Q8BT60 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpne3Q8BT60 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpne3Q8BT60 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.21□□□□□ -0.14
Cpne3Q8BT60 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpne3Q8BT60 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpne3Q8BT60 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.21□□□□□ -0.14
Cpne3Q8BT60 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cpne3Q8BT60 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.21□□□□□ -0.14
Cpne3Q8BT60 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.21□□□□□ -0.14
Cpne3Q8BT60 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Gm10060-201ENSMUST00000212002 111 ntBASIC14.2□□□□□ -0.14
Cpne3Q8BT60 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Gm18246-201ENSMUST00000221023 728 ntBASIC14.2□□□□□ -0.14
Cpne3Q8BT60 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cpne3Q8BT60 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne3Q8BT60 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Gm28659-201ENSMUST00000188013 759 ntBASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Cpne3Q8BT60 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.19□□□□□ -0.14
Cpne3Q8BT60 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms