Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4Q8BQZ5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4Q8BQZ5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4Q8BQZ5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4Q8BQZ5 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4Q8BQZ5 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4Q8BQZ5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4Q8BQZ5 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4Q8BQZ5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cpsf4Q8BQZ5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4Q8BQZ5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cpsf4Q8BQZ5 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.27□□□□□ -0.12
Cpsf4Q8BQZ5 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Gm17968-201ENSMUST00000194902 784 ntBASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Gm10175-201ENSMUST00000086013 645 ntBASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cpsf4Q8BQZ5 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Gm25911-201ENSMUST00000157621 56 ntBASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cpsf4Q8BQZ5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Gm18246-201ENSMUST00000221023 728 ntBASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cpsf4Q8BQZ5 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms