Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm27300-201ENSMUST00000184085 97 ntBASIC17.26■□□□□ 0.35
Samm50Q8BGH2 Gm27335-201ENSMUST00000184758 97 ntBASIC17.26■□□□□ 0.35
Samm50Q8BGH2 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.26■□□□□ 0.35
Samm50Q8BGH2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samm50Q8BGH2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samm50Q8BGH2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samm50Q8BGH2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samm50Q8BGH2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Samm50Q8BGH2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samm50Q8BGH2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samm50Q8BGH2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.26■□□□□ 0.35
Samm50Q8BGH2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samm50Q8BGH2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.26■□□□□ 0.35
Samm50Q8BGH2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samm50Q8BGH2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samm50Q8BGH2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Samm50Q8BGH2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Samm50Q8BGH2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Samm50Q8BGH2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Gm8318-201ENSMUST00000182954 872 ntBASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Samm50Q8BGH2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Gm23547-201ENSMUST00000158210 271 ntBASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Samm50Q8BGH2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms