Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vrk1Q80X41 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Gm14767-201ENSMUST00000121559 586 ntBASIC14.04□□□□□ -0.16
Vrk1Q80X41 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vrk1Q80X41 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vrk1Q80X41 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.03□□□□□ -0.16
Vrk1Q80X41 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vrk1Q80X41 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Vrk1Q80X41 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vrk1Q80X41 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Vrk1Q80X41 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vrk1Q80X41 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vrk1Q80X41 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vrk1Q80X41 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vrk1Q80X41 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vrk1Q80X41 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vrk1Q80X41 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.02□□□□□ -0.16
Vrk1Q80X41 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vrk1Q80X41 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vrk1Q80X41 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vrk1Q80X41 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Gm2423-201ENSMUST00000074863 733 ntBASIC14.02□□□□□ -0.17
Vrk1Q80X41 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vrk1Q80X41 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms