Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Gm14042-201ENSMUST00000120139 833 ntBASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rad54bQ6PFE3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Gm24589-201ENSMUST00000116692 94 ntBASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Gm7153-201ENSMUST00000117092 455 ntBASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Gm9103-201ENSMUST00000119371 405 ntBASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Gm2272-201ENSMUST00000194903 582 ntBASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rad54bQ6PFE3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rad54bQ6PFE3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rad54bQ6PFE3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rad54bQ6PFE3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rad54bQ6PFE3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rad54bQ6PFE3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rad54bQ6PFE3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rad54bQ6PFE3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rad54bQ6PFE3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rad54bQ6PFE3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.77□□□□□ -0.05
Rad54bQ6PFE3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.77□□□□□ -0.05
Rad54bQ6PFE3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rad54bQ6PFE3 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.77□□□□□ -0.05
Rad54bQ6PFE3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.77□□□□□ -0.05
Rad54bQ6PFE3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rad54bQ6PFE3 Gm10060-201ENSMUST00000212002 111 ntBASIC14.77□□□□□ -0.05
Rad54bQ6PFE3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rad54bQ6PFE3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rad54bQ6PFE3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rad54bQ6PFE3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms