Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC17.08■□□□□ 0.33
Nup98Q6PFD9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC17.08■□□□□ 0.33
Nup98Q6PFD9 Gm6745-201ENSMUST00000199216 526 ntBASIC17.08■□□□□ 0.33
Nup98Q6PFD9 Gm5425-201ENSMUST00000214125 459 ntBASIC17.08■□□□□ 0.33
Nup98Q6PFD9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nup98Q6PFD9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Nup98Q6PFD9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nup98Q6PFD9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup98Q6PFD9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Nup98Q6PFD9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup98Q6PFD9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup98Q6PFD9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup98Q6PFD9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nup98Q6PFD9 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.08■□□□□ 0.32
Nup98Q6PFD9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Mir6392-201ENSMUST00000184924 108 ntBASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Gm7558-201ENSMUST00000193221 1165 ntBASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Gm43438-201ENSMUST00000198133 379 ntBASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nup98Q6PFD9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Mir1894-201ENSMUST00000122802 81 ntBASIC17.06■□□□□ 0.32
Nup98Q6PFD9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nup98Q6PFD9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Gm11918-201ENSMUST00000121660 179 ntBASIC17.05■□□□□ 0.32
Nup98Q6PFD9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Gm37917-201ENSMUST00000194711 392 ntBASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Gm17795-201ENSMUST00000214505 757 ntBASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Gm19220-201ENSMUST00000222682 803 ntBASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nup98Q6PFD9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms