Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.27■□□□□ 0.04
Ccdc85bQ6PDY0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Ccdc85bQ6PDY0 Gm14722-201ENSMUST00000118943 689 ntBASIC15.27■□□□□ 0.04
Ccdc85bQ6PDY0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Ccdc85bQ6PDY0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Ccdc85bQ6PDY0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Ccdc85bQ6PDY0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85bQ6PDY0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.27■□□□□ 0.04
Ccdc85bQ6PDY0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.27■□□□□ 0.04
Ccdc85bQ6PDY0 Gm9257-201ENSMUST00000221254 232 ntBASIC15.27■□□□□ 0.04
Ccdc85bQ6PDY0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc85bQ6PDY0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc85bQ6PDY0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc85bQ6PDY0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc85bQ6PDY0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc85bQ6PDY0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc85bQ6PDY0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc85bQ6PDY0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc85bQ6PDY0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ccdc85bQ6PDY0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc85bQ6PDY0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Gm8062-201ENSMUST00000139696 444 ntBASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc85bQ6PDY0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc85bQ6PDY0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc85bQ6PDY0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc85bQ6PDY0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.24■□□□□ 0.03
Ccdc85bQ6PDY0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc85bQ6PDY0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc85bQ6PDY0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc85bQ6PDY0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc85bQ6PDY0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms