Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.65■□□□□ 0.1
Six2Q62232 Gm12260-201ENSMUST00000122447 411 ntBASIC15.65■□□□□ 0.1
Six2Q62232 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
Six2Q62232 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.65■□□□□ 0.1
Six2Q62232 AW822252-206ENSMUST00000208904 237 ntBASIC15.65■□□□□ 0.1
Six2Q62232 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.65■□□□□ 0.1
Six2Q62232 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Six2Q62232 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six2Q62232 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Six2Q62232 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Six2Q62232 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Six2Q62232 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.64■□□□□ 0.09
Six2Q62232 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.64■□□□□ 0.09
Six2Q62232 Gm5479-201ENSMUST00000160578 435 ntBASIC15.64■□□□□ 0.09
Six2Q62232 Gm27525-201ENSMUST00000184465 107 ntBASIC15.64■□□□□ 0.09
Six2Q62232 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.64■□□□□ 0.09
Six2Q62232 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.64■□□□□ 0.09
Six2Q62232 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.64■□□□□ 0.09
Six2Q62232 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Six2Q62232 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Six2Q62232 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Six2Q62232 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six2Q62232 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.63■□□□□ 0.09
Six2Q62232 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Six2Q62232 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.63■□□□□ 0.09
Six2Q62232 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Six2Q62232 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Six2Q62232 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Six2Q62232 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.63■□□□□ 0.09
Six2Q62232 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.63■□□□□ 0.09
Six2Q62232 Mir8117-201ENSMUST00000184773 107 ntBASIC15.63■□□□□ 0.09
Six2Q62232 Gm18206-201ENSMUST00000207027 926 ntBASIC15.63■□□□□ 0.09
Six2Q62232 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.63■□□□□ 0.09
Six2Q62232 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Gm10175-201ENSMUST00000086013 645 ntBASIC15.63■□□□□ 0.09
Six2Q62232 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Six2Q62232 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.63■□□□□ 0.09
Six2Q62232 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Six2Q62232 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six2Q62232 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six2Q62232 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six2Q62232 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.62■□□□□ 0.09
Six2Q62232 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.62■□□□□ 0.09
Six2Q62232 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Six2Q62232 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Six2Q62232 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Six2Q62232 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.62■□□□□ 0.09
Six2Q62232 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms