Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm15957-201ENSMUST00000118893 974 ntBASIC19.44■□□□□ 0.7
Gli3Q61602 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC19.44■□□□□ 0.7
Gli3Q61602 Gm26927-201ENSMUST00000182385 965 ntBASIC19.44■□□□□ 0.7
Gli3Q61602 Gm38223-201ENSMUST00000194484 695 ntBASIC19.44■□□□□ 0.7
Gli3Q61602 Gm45186-201ENSMUST00000206874 478 ntBASIC19.44■□□□□ 0.7
Gli3Q61602 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gli3Q61602 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gli3Q61602 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gli3Q61602 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gli3Q61602 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gli3Q61602 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Gli3Q61602 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gli3Q61602 Gm6015-201ENSMUST00000217493 1586 ntBASIC19.43■□□□□ 0.7
Gli3Q61602 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gli3Q61602 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC19.43■□□□□ 0.7
Gli3Q61602 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gli3Q61602 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC19.43■□□□□ 0.7
Gli3Q61602 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Gli3Q61602 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC19.43■□□□□ 0.7
Gli3Q61602 Gm25927-201ENSMUST00000175058 117 ntBASIC19.43■□□□□ 0.7
Gli3Q61602 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC19.43■□□□□ 0.7
Gli3Q61602 Gm18916-201ENSMUST00000198264 1246 ntBASIC19.43■□□□□ 0.7
Gli3Q61602 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Gli3Q61602 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gli3Q61602 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gli3Q61602 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Gli3Q61602 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gli3Q61602 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gli3Q61602 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Gli3Q61602 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gli3Q61602 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gli3Q61602 Gm24990-201ENSMUST00000157406 323 ntBASIC19.42■□□□□ 0.7
Gli3Q61602 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gli3Q61602 Mir5120-201ENSMUST00000175020 78 ntBASIC19.42■□□□□ 0.7
Gli3Q61602 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC19.42■□□□□ 0.7
Gli3Q61602 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gli3Q61602 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gli3Q61602 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gli3Q61602 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gli3Q61602 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gli3Q61602 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gli3Q61602 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.42■□□□□ 0.7
Gli3Q61602 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gli3Q61602 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gli3Q61602 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gli3Q61602 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gli3Q61602 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gli3Q61602 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC19.41■□□□□ 0.7
Gli3Q61602 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gli3Q61602 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gli3Q61602 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gli3Q61602 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gli3Q61602 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gli3Q61602 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gli3Q61602 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.41■□□□□ 0.7
Gli3Q61602 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gli3Q61602 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Gli3Q61602 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gli3Q61602 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gli3Q61602 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Gli3Q61602 Gm11628-201ENSMUST00000117568 171 ntBASIC19.4■□□□□ 0.7
Gli3Q61602 Gm8805-201ENSMUST00000117848 313 ntBASIC19.4■□□□□ 0.7
Gli3Q61602 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gli3Q61602 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gli3Q61602 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gli3Q61602 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC19.4■□□□□ 0.7
Gli3Q61602 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC19.4■□□□□ 0.7
Gli3Q61602 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Gli3Q61602 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Gli3Q61602 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gli3Q61602 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gli3Q61602 Gm8099-201ENSMUST00000200510 742 ntBASIC19.4■□□□□ 0.7
Gli3Q61602 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gli3Q61602 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gli3Q61602 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gli3Q61602 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gli3Q61602 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gli3Q61602 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Gli3Q61602 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gli3Q61602 Gm37015-201ENSMUST00000192763 1521 ntBASIC19.4■□□□□ 0.7
Gli3Q61602 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Gli3Q61602 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Gli3Q61602 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gli3Q61602 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Gli3Q61602 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
Gli3Q61602 Gm13385-201ENSMUST00000121089 220 ntBASIC19.4■□□□□ 0.7
Gli3Q61602 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC19.4■□□□□ 0.7
Gli3Q61602 Gm25668-201ENSMUST00000157700 129 ntBASIC19.4■□□□□ 0.7
Gli3Q61602 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Gli3Q61602 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Gli3Q61602 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gli3Q61602 Gm4935-201ENSMUST00000221316 1198 ntBASIC19.4■□□□□ 0.7
Gli3Q61602 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gli3Q61602 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gli3Q61602 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Gli3Q61602 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Gli3Q61602 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC19.39■□□□□ 0.69
Gli3Q61602 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gli3Q61602 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Gli3Q61602 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms