Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Urb1Q571H0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Urb1Q571H0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Urb1Q571H0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Urb1Q571H0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.53□□□□□ -0.24
Urb1Q571H0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Urb1Q571H0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Urb1Q571H0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Urb1Q571H0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.53□□□□□ -0.24
Urb1Q571H0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Urb1Q571H0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Urb1Q571H0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Mir6420-201ENSMUST00000185032 102 ntBASIC13.53□□□□□ -0.24
Urb1Q571H0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.53□□□□□ -0.24
Urb1Q571H0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Urb1Q571H0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Urb1Q571H0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Urb1Q571H0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Urb1Q571H0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Urb1Q571H0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Urb1Q571H0 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.52□□□□□ -0.24
Urb1Q571H0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.52□□□□□ -0.24
Urb1Q571H0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Urb1Q571H0 Gm6266-201ENSMUST00000203844 806 ntBASIC13.52□□□□□ -0.24
Urb1Q571H0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.52□□□□□ -0.24
Urb1Q571H0 Dupd1-202ENSMUST00000224735 548 ntBASIC13.52□□□□□ -0.24
Urb1Q571H0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Urb1Q571H0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Urb1Q571H0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Urb1Q571H0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Urb1Q571H0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Urb1Q571H0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Urb1Q571H0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Urb1Q571H0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Urb1Q571H0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Urb1Q571H0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Urb1Q571H0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Urb1Q571H0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.52□□□□□ -0.25
Urb1Q571H0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Urb1Q571H0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Urb1Q571H0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Urb1Q571H0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Urb1Q571H0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Urb1Q571H0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Urb1Q571H0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
Urb1Q571H0 Gm11918-201ENSMUST00000121660 179 ntBASIC13.52□□□□□ -0.25
Urb1Q571H0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Urb1Q571H0 Gm8602-201ENSMUST00000184045 607 ntBASIC13.52□□□□□ -0.25
Urb1Q571H0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Urb1Q571H0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Urb1Q571H0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.52□□□□□ -0.25
Urb1Q571H0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Urb1Q571H0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.52□□□□□ -0.25
Urb1Q571H0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Urb1Q571H0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Urb1Q571H0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Urb1Q571H0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Urb1Q571H0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Urb1Q571H0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Urb1Q571H0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Urb1Q571H0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Urb1Q571H0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Urb1Q571H0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Urb1Q571H0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Urb1Q571H0 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.51□□□□□ -0.25
Urb1Q571H0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Urb1Q571H0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Urb1Q571H0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.51□□□□□ -0.25
Urb1Q571H0 Gm45668-201ENSMUST00000211271 493 ntBASIC13.51□□□□□ -0.25
Urb1Q571H0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Urb1Q571H0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Urb1Q571H0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Urb1Q571H0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Urb1Q571H0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms