Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.55□□□□□ -0.08
Scn2bQ56A07 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn2bQ56A07 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Scn2bQ56A07 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Gm11764-201ENSMUST00000120221 623 ntBASIC14.54□□□□□ -0.08
Scn2bQ56A07 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Gm18206-201ENSMUST00000207027 926 ntBASIC14.54□□□□□ -0.08
Scn2bQ56A07 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn2bQ56A07 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn2bQ56A07 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Scn2bQ56A07 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Scn2bQ56A07 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Scn2bQ56A07 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn2bQ56A07 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn2bQ56A07 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.52□□□□□ -0.08
Scn2bQ56A07 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn2bQ56A07 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn2bQ56A07 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Scn2bQ56A07 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Scn2bQ56A07 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn2bQ56A07 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.52□□□□□ -0.08
Scn2bQ56A07 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn2bQ56A07 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn2bQ56A07 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.52□□□□□ -0.08
Scn2bQ56A07 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Scn2bQ56A07 Gm1401-201ENSMUST00000122048 772 ntBASIC14.52□□□□□ -0.09
Scn2bQ56A07 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.52□□□□□ -0.09
Scn2bQ56A07 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scn2bQ56A07 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Scn2bQ56A07 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.52□□□□□ -0.09
Scn2bQ56A07 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scn2bQ56A07 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.52□□□□□ -0.09
Scn2bQ56A07 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms