Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Gm21038-201ENSMUST00000222205 1383 ntBASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Gm24644-201ENSMUST00000157114 139 ntBASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Mir8109-201ENSMUST00000184375 117 ntBASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Shank3Q4ACU6 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Shank3Q4ACU6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Gm27486-201ENSMUST00000184923 80 ntBASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Gm18905-201ENSMUST00000205454 928 ntBASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Gm12928-201ENSMUST00000117115 573 ntBASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Gm27572-201ENSMUST00000183702 255 ntBASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Gm43094-201ENSMUST00000196549 921 ntBASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Shank3Q4ACU6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Gm13612-201ENSMUST00000119276 390 ntBASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC17.94■□□□□ 0.46
Shank3Q4ACU6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Gm43118-201ENSMUST00000199149 775 ntBASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Gm45841-201ENSMUST00000207700 164 ntBASIC17.93■□□□□ 0.46
Shank3Q4ACU6 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.93■□□□□ 0.46
Shank3Q4ACU6 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms