Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ckap2Q3V1H1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ckap2Q3V1H1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
Ckap2Q3V1H1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ckap2Q3V1H1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ckap2Q3V1H1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ckap2Q3V1H1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ckap2Q3V1H1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ckap2Q3V1H1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ckap2Q3V1H1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Ckap2Q3V1H1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Gm2213-201ENSMUST00000197485 688 ntBASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ckap2Q3V1H1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Gm10275-202ENSMUST00000168697 495 ntBASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Gm10275-201ENSMUST00000092620 635 ntBASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ckap2Q3V1H1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ckap2Q3V1H1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ckap2Q3V1H1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ckap2Q3V1H1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ckap2Q3V1H1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ckap2Q3V1H1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.8■□□□□ 0.28
Ckap2Q3V1H1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms