Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim40Q3UWA4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Gm6659-201ENSMUST00000174752 547 ntBASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Mir3081-201ENSMUST00000175305 84 ntBASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim40Q3UWA4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.8□□□□□ -0.2
Trim40Q3UWA4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim40Q3UWA4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Gm8344-201ENSMUST00000119813 856 ntBASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms