Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.04□□□□□ -0.32
Chd8Q09XV5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd8Q09XV5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd8Q09XV5 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd8Q09XV5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd8Q09XV5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chd8Q09XV5 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.04□□□□□ -0.32
Chd8Q09XV5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chd8Q09XV5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Gm12217-201ENSMUST00000118858 696 ntBASIC13.03□□□□□ -0.32
Chd8Q09XV5 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.03□□□□□ -0.32
Chd8Q09XV5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.03□□□□□ -0.32
Chd8Q09XV5 Gm19078-201ENSMUST00000206311 727 ntBASIC13.03□□□□□ -0.32
Chd8Q09XV5 Gm8598-201ENSMUST00000221184 836 ntBASIC13.03□□□□□ -0.32
Chd8Q09XV5 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chd8Q09XV5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chd8Q09XV5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chd8Q09XV5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chd8Q09XV5 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Chd8Q09XV5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Chd8Q09XV5 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.02□□□□□ -0.32
Chd8Q09XV5 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.02□□□□□ -0.32
Chd8Q09XV5 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.02□□□□□ -0.32
Chd8Q09XV5 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.02□□□□□ -0.32
Chd8Q09XV5 Gm45219-201ENSMUST00000205602 465 ntBASIC13.02□□□□□ -0.32
Chd8Q09XV5 Gm44551-201ENSMUST00000208804 171 ntBASIC13.02□□□□□ -0.32
Chd8Q09XV5 Gm7046-201ENSMUST00000221351 977 ntBASIC13.02□□□□□ -0.32
Chd8Q09XV5 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chd8Q09XV5 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chd8Q09XV5 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chd8Q09XV5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Chd8Q09XV5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd8Q09XV5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd8Q09XV5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd8Q09XV5 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chd8Q09XV5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd8Q09XV5 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chd8Q09XV5 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.02□□□□□ -0.33
Chd8Q09XV5 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.02□□□□□ -0.33
Chd8Q09XV5 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.02□□□□□ -0.33
Chd8Q09XV5 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd8Q09XV5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chd8Q09XV5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd8Q09XV5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chd8Q09XV5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.01□□□□□ -0.33
Chd8Q09XV5 Gm11597-201ENSMUST00000121423 964 ntBASIC13.01□□□□□ -0.33
Chd8Q09XV5 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Gm17795-201ENSMUST00000214505 757 ntBASIC13.01□□□□□ -0.33
Chd8Q09XV5 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.01□□□□□ -0.33
Chd8Q09XV5 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.01□□□□□ -0.33
Chd8Q09XV5 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chd8Q09XV5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms