Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Hspg2Q05793 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC10.63□□□□□ -0.71
Hspg2Q05793 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.63□□□□□ -0.71
Hspg2Q05793 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.63□□□□□ -0.71
Hspg2Q05793 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.63□□□□□ -0.71
Hspg2Q05793 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC10.63□□□□□ -0.71
Hspg2Q05793 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC10.63□□□□□ -0.71
Hspg2Q05793 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Hspg2Q05793 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.63□□□□□ -0.71
Hspg2Q05793 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC10.63□□□□□ -0.71
Hspg2Q05793 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Hspg2Q05793 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Hspg2Q05793 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Hspg2Q05793 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Gm11839-201ENSMUST00000120647 1953 ntBASIC10.63□□□□□ -0.71
Hspg2Q05793 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hspg2Q05793 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.62□□□□□ -0.71
Hspg2Q05793 Gm4857-201ENSMUST00000192718 785 ntBASIC10.62□□□□□ -0.71
Hspg2Q05793 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.62□□□□□ -0.71
Hspg2Q05793 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC10.62□□□□□ -0.71
Hspg2Q05793 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Hspg2Q05793 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Hspg2Q05793 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Gm27847-201ENSMUST00000183711 107 ntBASIC10.62□□□□□ -0.71
Hspg2Q05793 Gm27375-201ENSMUST00000183799 107 ntBASIC10.62□□□□□ -0.71
Hspg2Q05793 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.62□□□□□ -0.71
Hspg2Q05793 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Hspg2Q05793 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.62□□□□□ -0.71
Hspg2Q05793 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Hspg2Q05793 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Gm5354-201ENSMUST00000182417 973 ntBASIC10.62□□□□□ -0.71
Hspg2Q05793 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.62□□□□□ -0.71
Hspg2Q05793 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.62□□□□□ -0.71
Hspg2Q05793 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.62□□□□□ -0.71
Hspg2Q05793 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.62□□□□□ -0.71
Hspg2Q05793 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Hspg2Q05793 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Hspg2Q05793 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.61□□□□□ -0.71
Hspg2Q05793 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Hspg2Q05793 Gm27514-201ENSMUST00000183692 110 ntBASIC10.61□□□□□ -0.71
Hspg2Q05793 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.61□□□□□ -0.71
Hspg2Q05793 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.61□□□□□ -0.71
Hspg2Q05793 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.61□□□□□ -0.71
Hspg2Q05793 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Hspg2Q05793 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Hspg2Q05793 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.61□□□□□ -0.71
Hspg2Q05793 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Hspg2Q05793 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.61□□□□□ -0.71
Hspg2Q05793 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.61□□□□□ -0.71
Hspg2Q05793 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Hspg2Q05793 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms